Neoplasm by Site — Genomics

Neoplasm by Site — Genomics · CancerIndex

Genomics

Gene alteration frequencies by cohort

477 cohorts mapped to this entity or its descendants. Each frequency is affected / profiled within one cohort; cohorts are shown separately because case selection, sequencing depth and definitions differ. By default the cohort with the most cases profiled is shown.

Combined Hepatocellular and Intrahepatic Cholangiocarcinoma (Peking University, Cancer Cell 2019) hccihch_pku_2019Peking University

173 cases with simple somatic mutation data · 173 cases total · 2026-01-07 · mapped to Combined Hepatocellular Carcinoma and Cholangiocarcinoma EXACT_IDENTIFIER

cbioportalObserved30 genes · frequency = affected / profiled, as published by the cohort.

#	Gene	Alteration	Affected (n)	Profiled (n)	Frequency (%)

Cohorts mapped to a descendant (e.g. a subtype) are included because their cases belong to this entity by definition; the mapping and its match type are shown per cohort.

1	TP53	Ssm	74	173	42.8%	cbioportal
2	TTN	Ssm	28	173	16.2%	cbioportal
3	MUC16	Ssm	25	173	14.5%	cbioportal
4	CSMD3	Ssm	21	173	12.1%	cbioportal
5	ADGRV1	Ssm	18	173	10.4%	cbioportal
6	LRP1B	Ssm	17	173	9.8%	cbioportal
7	ABCA13	Ssm	16	173	9.2%	cbioportal
8	KMT2D	Ssm	15	173	8.7%	cbioportal
9	ARID1A	Ssm	14	173	8.1%	cbioportal
10	RB1	Ssm	14	173	8.1%	cbioportal
14	HYDIN	Ssm	13	173	7.5%	cbioportal
11	AXIN1	Ssm	13	173	7.5%	cbioportal
13	COL6A6	Ssm	13	173	7.5%	cbioportal
12	COL12A1	Ssm	13	173	7.5%	cbioportal
16	KEAP1	Ssm	12	173	6.9%	cbioportal
15	CSMD2	Ssm	12	173	6.9%	cbioportal
18	SYNE1	Ssm	12	173	6.9%	cbioportal
17	PCLO	Ssm	12	173	6.9%	cbioportal
20	DNAH5	Ssm	11	173	6.4%	cbioportal
21	DOCK2	Ssm	11	173	6.4%	cbioportal
22	PTEN	Ssm	11	173	6.4%	cbioportal
25	USH2A	Ssm	11	173	6.4%	cbioportal
19	ATP10B	Ssm	11	173	6.4%	cbioportal
24	SDK1	Ssm	11	173	6.4%	cbioportal
23	RAI1	Ssm	11	173	6.4%	cbioportal
31	LAMA1	Ssm	10	173	5.8%	cbioportal
34	NEB	Ssm	10	173	5.8%	cbioportal
36	SYCP2	Ssm	10	173	5.8%	cbioportal
32	MACF1	Ssm	10	173	5.8%	cbioportal
26	ADAMTS20	Ssm	10	173	5.8%	cbioportal