Cancer Family
Soft Tissue Neoplasm
CI-CAN-00000354Explore in graph →
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Cancer Family
CI-CAN-00000354Explore in graph →
Variants & evidence
382 evidence items mapped to this entity or its descendants, grouped by molecular profile, then therapy. 50 items per page.
| Therapy | Cancer | Type | Level | Direction · significance | Rating (1–5) | Status | Evidence | Source |
|---|---|---|---|---|---|---|---|---|
| GLI1 Fusion1 | ||||||||
| (diagnostic) | GLI1-Altered Soft Tissue TumorALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID1844Pericytoma with t(7;12) is a soft tissue tumor characterized by fusion of the ACTB and GLI genes through the translocation t(7;12)(p22;q13). In this study the genomic breakpoints of 5 cases were chara… (full text at CIViC) PMID 15555571 · Dahlén et al., 2004 · Open in CIViC | civic |
| FOSB Fusion1 | ||||||||
| (diagnostic) | Pseudomyogenic Hemangioendothelioma | Diagnostic | B | Supports Positive | 4 | accepted | EID12779In this 2019 study, targeted RNA sequencing using the Archer FusionPlex technology was validated and implemented to detect oncogenic fusion transcripts in 62 genes recurrently rearranged in solid tumo… (full text at CIViC) PMID 30459475 · Zhu et al., 2019 · Open in CIViC | civic |
| ALK F1174L + ALK Fusion1 | ||||||||
| Crizotinib | Inflammatory Myofibroblastic Tumor | Predictive | C | Supports Resistance | 3 | accepted | EID32In a patient with RANBP2::ALK-positive inflammatory myofibroblastic tumor, acquisition of the ALK F1174L mutation following crizotinib treatment was associated with acquired resistance. Ba/F3 studies … (full text at CIViC) PMID 21030459 · Sasaki et al., 2010 · Open in CIViC | civic |
| APC Mutation + CTNNB1 Activating MutationAPCCTNNB11 | ||||||||
| Nirogacestat | Desmoid FibromatosisALIAS | Predictive | A | Supports Sensitivity Response | 2 | submitted | EID12023In a phase 3 trial (NCT03785964) involving 142 adults with progressing desmoid tumors, the gamma-secretase inhibitor nirogacestat demonstrated a significant progression-free survival benefit compared … (full text at CIViC) PMID 36884323 · Gounder et al., 2023 · Open in CIViC | civic |
| TFE3 Fusion4 | ||||||||
| (diagnostic) | Alveolar Soft Part Sarcoma | Diagnostic | B | Supports Positive | 4 | accepted | EID9978Alveolar soft part sarcoma (ASPS) is characterized by the presence of an unbalanced translocation der(17)t(X;17)(p11;q25). In this 2001 paper, FISH with YAC and cosmid probes was used to localize the… (full text at CIViC) PMID 11244503 · Ladanyi et al., 2001 · Open in CIViC | civic |
| 〃 | Alveolar Soft Part Sarcoma | Diagnostic | B | Supports Positive | 4 | accepted | EID11530In this 2012 paper, the authors assessed potential characteristic markers in 24 alveolar soft part sarcoma (ASPS cases), age range from 13 to 61 years, and 23 non-ASPS tumors. Nuclear immunoreactivity… (full text at CIViC) PMID 21835426 · Tsuji et al., 2012 · Open in CIViC | civic |
| 〃 | Alveolar Soft Part Sarcoma | Diagnostic | B | Supports Positive | 3 | |||
| CCNB3 Fusion3 | ||||||||
| (diagnostic) | Clear Cell Sarcoma of the KidneyALIAS | Diagnostic | C | Supports Positive | 2 | accepted | EID12003In this 2018 study, the authors aimed to identify driver events in 'double negative' clear cell sarcoma of the kidney (CCSK) where neither BCOR ITDs nor the YWHAE::NUTM2 gene fusion are detected. Elev… (full text at CIViC) PMID 28833375 · Wong et al., 2018 · Open in CIViC | civic |
| 〃 | Clear Cell Sarcoma of the KidneyALIAS | Diagnostic | C | Supports Positive | 2 | accepted | EID12004In this 2020 study, the authors report two patients with BCOR::CCNB3 fusion-positive clear cell sarcoma of the kidney (CCSK). Cases were males aged 10 and 14 years who presented with advanced disease.… (full text at CIViC) PMID 31876361 · Han et al., 2020 · Open in CIViC | civic |
| 〃 | Clear Cell Sarcoma of the KidneyALIAS | |||||||
| BCOR ITD4 | ||||||||
| (diagnostic) | Clear Cell Sarcoma of the KidneyALIAS | Diagnostic | B | Supports Positive | 5 | accepted | EID10801BCOR internal tandem duplications (ITDs) were found frequently in cases of clear cell sarcoma of kidney (CCSK), a rare pediatric renal cancer. The study initially evaluated 3 CCSK samples by whole exo… (full text at CIViC) PMID 26573325 · Roy et al., 2015 · Open in CIViC | civic |
| (oncogenic) | Clear Cell Sarcoma of the KidneyALIAS | Oncogenic | B | Supports Oncogenicity | 4 | accepted | EID1080227 cases of CCSK were profiled by whole exome sequencing and whole transcriptomics, identifying BCOR ITDs in the majority (23/27, 85%). BCOR encodes a key constituent of a variant polycomb repressive… (full text at CIViC) PMID 26573325 · Roy et al., 2015 · Open in CIViC | civic |
| (diagnostic) | Clear Cell Sarcoma of the KidneyALIAS | |||||||
| BRAF Exon 15 Mutation2 | ||||||||
| Regorafenib Anhydrous | Gastrointestinal Stromal Tumor | Predictive | C | Does Not Support Sensitivity Response | 2 | accepted | EID4121This phase II clinical trial of regorafenib (NCT01068769) examined the long term safety and efficacy of regorafenib monotherapy in patients with metastatic and/or unresectable gastrointestinal stromal… (full text at CIViC) PMID 27371698 · Ben-Ami et al., 2016 · Open in CIViC | civic |
| 〃 | Gastrointestinal Stromal Tumor | Predictive | C | Supports Resistance | 1 | accepted | EID4605This retrospective study of a phase 2 clinical trial (NCT01068769) examined regorafenib safety and efficacy in advanced gastrointestinal stromal tumor (GIST) patients refractory to at least imatinib a… (full text at CIViC) PMID 22614970 · George et al., 2012 · Open in CIViC | civic |
| BRAF V600E1 | ||||||||
| Vemurafenib | Clear Cell Sarcoma of Soft TissueALIAS | Predictive | C | Supports Sensitivity Response | — | submitted | EID3779In a case report, a clear cell sarcoma patient harboring BRAF V600E mutation with distant metastases was associated with a complete response to vemurafenib monotherapy at 8 weeks of treatment. Prior t… (full text at CIViC) PMID 26286452 · Protsenko et al., 2015 · Open in CIViC | civic |
| NTRK1 Fusion1 | ||||||||
| (oncogenic) | Undifferentiated Pleomorphic Sarcoma | Oncogenic | C | Supports Oncogenicity | 1 | submitted | EID13059Dufresne et al. identified a CCDC171::NTRK1 fusion by whole-exome RNA sequencing in one undifferentiated pleomorphic sarcoma from an ambispective cohort of NTRK-rearranged mesenchymal tumors. The fusi… (full text at CIViC) PMID 37054503 · Dufresne et al., 2023 · Open in CIViC | civic |
| CDKN2A Deletion1 | ||||||||
| Palbociclib | Gastrointestinal Stromal Tumor | Predictive | B | Does Not Support Sensitivity Response | 4 | submitted | EID7311In a phase 2 trial, patients with GIST bearing CDKN2A gene loss were treated with Palbociclib. 86.4% of patients had PD at 4 months. PMID 30979737 · Toulmonde et al., 2019 · Open in CIViC | civic |
| CDKN2A Loss1 | ||||||||
| Palbociclib | Dermatofibrosarcoma Protuberans | Predictive | D | Supports Sensitivity Response | 2 | accepted | EID1881An imatinib-resistant cell line, DFSP105, was established from a dermatofibrosarcoma protuberans which had progressed to a high-grade fibrosarcomatous DFSP. The disease-associated COL1A1-PDGFB fusion … (full text at CIViC) PMID 25852058 · Eilers et al., 2015 · Open in CIViC | civic |
| PDGFB Fusion12 | ||||||||
| (diagnostic) | Dermatofibrosarcoma Protuberans | Diagnostic | B | Supports Positive | 4 | accepted | EID9787This study analyzed 27 formalin-fixed-paraffin-embedded samples of patients with known dermatofibrosarcoma protuberans (DFSP) using a newly designed multiplex RT-PCR assay. The assay identified COL1A1… (full text at CIViC) PMID 17950782 · Patel et al., 2008 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Diagnostic | B | Supports Positive | 4 | accepted | EID12417The authors studied 27 archival formalin-fixed, paraffin-embedded (FFPE) samples of dermatofibrosarcoma protuberans (DFSP) cases obtained from Texas Children's Hospital and University of Texas MD Ande… (full text at CIViC) PMID 17950782 · Patel et al., 2008 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Diagnostic | B | Supports Positive | ||||
| CSF1 Overexpression1 | ||||||||
| Pexidartinib | Tenosynovial Giant Cell Tumor | Predictive | B | Supports Sensitivity Response | 3 | submitted | EID196923 patients were enrolled in the phase 2 extension study. The chosen phase 2 dose of PLX3397 was 1000 mg per day. 12/23 patients with tenosynovial giant-cell tumors had a partial response and 7 patien… (full text at CIViC) PMID 26222558 · Tap et al., 2015 · Open in CIViC | civic |
| CTNNB1 Exon 3 Mutation3 | ||||||||
| (prognostic) | Desmoid FibromatosisALIAS | Prognostic | B | Does Not Support Poor Outcome | 4 | accepted | EID7784This study illustrates the prevalence of CTNNB1 mutations in sporadic desmoid tumors, and examines whether the presence of CTNNB1 mutations correlates with the disease outcome. CTNNB1 mutations (inclu… (full text at CIViC) PMID 23960186 · Mullen et al., 2013 · Open in CIViC | civic |
| (diagnostic) | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 4 | submitted | EID12114An analysis of 260 typical desmoid tumors and 191 cases of spindle cell lesions (which can be difficult to distinguish morphologically from desmoid tumors) identified CTNNB1 mutations in 88% of desmoi… (full text at CIViC) PMID 22766794 · Le Guellec et al., 2012 · Open in CIViC | civic |
| 〃 | Desmoid FibromatosisALIAS | |||||||
| CTNNB1 S45F6 | ||||||||
| (diagnostic) | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 4 | accepted | EID2974Desmoid fibromatosis is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence. Beta-Catenin deregulation has been commonly identified in sporadic desmoids. CTNNB1 mutat… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC | civic |
| 〃 | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 4 | accepted | EID5071In this study a collection of 254 sporadic desmoid tumors were analysed for presence of mutations in CTNNB1. A mutation in exon 3 of the CTNNB1 gene was identified in 223 (88%) of the 254 cases. The C… (full text at CIViC) PMID 22766794 · Le Guellec et al., 2012 · Open in CIViC | civic |
| (prognostic) | Desmoid FibromatosisALIAS | |||||||
| CTNNB1 S45P3 | ||||||||
| (diagnostic) | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID2975Desmoid fibromatosis is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence. Beta-Catenin deregulation has been commonly identified in sporadic desmoids. CTNNB1 mutat… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC | civic |
| 〃 | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID5072In this study a collection of 254 sporadic desmoid tumors were analysed for presence of mutations in CTNNB1. A mutation in exon 3 of the CTNNB1 gene was identified in 223 (88%) of the 254 cases. The C… (full text at CIViC) PMID 22766794 · Le Guellec et al., 2012 · Open in CIViC | civic |
| (prognostic) | Desmoid FibromatosisALIAS | |||||||
| CTNNB1 T41A4 | ||||||||
| (diagnostic) | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 4 | accepted | EID2973Desmoid fibromatosis is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence. Beta-Catenin deregulation has been commonly identified in sporadic desmoids. CTNNB1 mutat… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC | civic |
| 〃 | Desmoid FibromatosisALIAS | Diagnostic | B | Supports Positive | 4 | accepted | EID5070In this study a collection of 254 sporadic desmoid tumors were analysed for presence of mutations in CTNNB1. A mutation in exon 3 of the CTNNB1 gene was identified in 223 (88%) of the 254 cases. The C… (full text at CIViC) PMID 22766794 · Le Guellec et al., 2012 · Open in CIViC | civic |
| (prognostic) | Desmoid FibromatosisALIAS | |||||||
Data updated 23 hours agoSource updated unknownsource: civic (CC0)
Evidence levels, directions and ratings are those assigned by CIViC curators. "Submitted" items have not completed curation review. This is not treatment guidance.
| accepted |
EID11531This study by Ju, et al. (2018) consisted of nine cases of alveolar soft part sarcoma (ASPS). The age of patients ranged from 7 to 36 years. Total mRNA was extracted from seven of the nine ASPS paraff… (full text at CIViC) PMID 28766250 · Ju et al., 2018 · Open in CIViC |
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| (oncogenic) | Alveolar Soft Part Sarcoma | Oncogenic | D | Supports Oncogenicity | 4 | accepted | EID9883Goodwin, et al. (2014) presented in vivo study on mice carrying the ASPSCR1-TFE3 fusion gene. The results showed that Rosa26-LSL-AT3/CreER mice expressed tumors histological equal to the human’s alveo… (full text at CIViC) PMID 25453902 · Goodwin et al., 2014 · Open in CIViC | civic |
| Diagnostic |
| C |
| Supports Positive |
| 2 |
| accepted |
EID12005In this 2017 study, the authors describe two primary renal sarcomas harboring BCOR::CCNB3 gene fusions and compare the morphological and immunochemical features to typical clear cell sarcoma of the ki… (full text at CIViC) PMID 28817404 · Argani et al., 2017 · Open in CIViC |
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| Diagnostic |
| B |
| Supports Positive |
| 4 |
| accepted |
EID11423High BCOR expression which was associated with an internal tandem duplication (ITD) of 89 to 144 bp in exon 16 of the BCOR gene was identified in 20 of 20 (100%) of cases of clear cell sarcoma of the … (full text at CIViC) PMID 26098867 · Ueno-Yokohata et al., 2015 · Open in CIViC |
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| 〃 | Clear Cell Sarcoma of the KidneyALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID11424Whole transcriptome sequencing on tumors from 8 patients with clear cell sarcoma of the kidney identified BCOR ITD and overexpression of BCOR in all samples. The BCOR ITD was confirmed on tumor DNA.… (full text at CIViC) PMID 26516930 · Astolfi et al., 2015 · Open in CIViC | civic |
| 4 |
| accepted |
EID12418In this study, paraffin-embedded tissue microarray (TMA) evaluation of translocation t(17;22)(q22;q13) was performed on 40 tissue samples from 24 female and 16 male DFSP patients (37 primary tumors, 3… (full text at CIViC) PMID 21111450 · Segura et al., 2011 · Open in CIViC |
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| (oncogenic) | Dermatofibrosarcoma Protuberans | Oncogenic | B | Supports Oncogenicity | 3 | accepted | EID10314In this study, 57 cases of dermatofibrosarcoma protuberans (DFSP) were evaluated. The COL1A1-PDGFB fusion was detected in 42 (74%) out of the 57 sample after performing targeted PCR amplification and … (full text at CIViC) PMID 17431412 · Takahira et al., 2007 · Open in CIViC | civic |
| (diagnostic) | Dermatofibrosarcoma Protuberans | Diagnostic | B | Supports Positive | 3 | accepted | EID11729In this 2022 study by Peng et al., the authors performed whole-genome sequencing on 53 tumor-normal pairs from patients with Dermatofibrosarcoma Protuberans (DFSP) to define its comprehensive genomic … (full text at CIViC) PMID 35441365 · Peng et al., 2022 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Diagnostic | C | Supports Positive | 3 | accepted | EID12416The is a cytogenetic case study of a 10-year-old female with pure pigmented dermatofibrosarcoma protuberans (DFSP), also called Bednar tumor, on her right shoulder. Karyotype of tumor cells was 47,XX … (full text at CIViC) PMID 16843106 · Craver et al., 2006 · Open in CIViC | civic |
| Imatinib | Dermatofibrosarcoma Protuberans | Predictive | A | Supports Sensitivity Response | 4 | submitted | EID11271In this phase II, open-label, single-arm trial, 106 patients with 40 different malignancies were enrolled (78.5% solid tumors, 21.5% hematologic malignancies), including 12 with COL1A1-PDGFB fusion-po… (full text at CIViC) PMID 18451237 · Heinrich et al., 2008 · Open in CIViC | civic |
| Imatinib Mesylate | Dermatofibrosarcoma Protuberans | Predictive | B | Supports Sensitivity Response | 4 | submitted | EID10336In this non-controlled phase 2 clinical trial, 25 patients with primary or recurrent Dermatofibrosarcoma Protuberans (DFSP) were recruited. Only 21 had the t(17;22) COL1A-PDGFB fusion as detected thro… (full text at CIViC) PMID 20439456 · Kérob et al., 2010 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Predictive | B | Supports Sensitivity Response | 2 | submitted | EID10332Ten patients with Dermatofibrosarcoma Protuberans (DFSP) were enrolled in phase II study to investigate the response to imatinib in locally advanced or metastatic DFSP. Eight of the ten patients had l… (full text at CIViC) PMID 15681532 · McArthur et al., 2005 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Predictive | D | Supports Sensitivity Response | 4 | submitted | EID10334In this study, DFSP-transformed cell lines (4A and 5A) were used in-vitro and in-vivo to investigate the possibility of blocking the autocrine loop that forms as a result of the t(17;22) COL1A1-PDGFB … (full text at CIViC) PMID 11291071 · Greco et al., 2001 · Open in CIViC | civic |
| 〃 | Dermatofibrosarcoma Protuberans | Predictive | D | Supports Sensitivity Response | 4 | submitted | EID10335In this study, NIH3T3 cell lines were used to characterize the COLIA1/PDGFB fusion protein functionally and structurally in Dermatofibrosarcoma Protuberans (DFSP). The cell lines B5/5 (COLIA1/PDGFB tr… (full text at CIViC) PMID 10446987 · Shimizu et al., 1999 · Open in CIViC | civic |
| Sunitinib | Dermatofibrosarcoma Protuberans | Predictive | C | Supports Sensitivity Response | 3 | accepted | EID7991A 37-year-old man presented with dermatofibrosarcoma protuberans (DFSP). Post resection, multiple nodular metastases were found in both lungs and the disease progressed following treatments with cytot… (full text at CIViC) PMID 29760553 · Xiao et al., 2018 · Open in CIViC | civic |
| Diagnostic |
| B |
| Supports Positive |
| 4 |
| submitted |
EID12115Exon 3 sequencing of CTNNB1 in 101 extra-abdominal desmoid fibromatosis revealed mutation rates of 87% including T41A (39.5%), S45P (9%), S45F (36.5%), and deletion (2%). PMID 20197769 · Dômont et al., 2010 · Open in CIViC |
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| Prognostic |
| B |
| Supports Poor Outcome |
| 4 |
| accepted |
EID9788This was a multi-institutional retrospective cohort study which looked at the prognostic value of CTNNB1 gene mutations in aggressive fibromatosis (also known as desmoid tumor). The study analyzed 101… (full text at CIViC) PMID 25341748 · van Broekhoven et al., 2015 · Open in CIViC |
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| 〃 | Desmoid FibromatosisALIAS | Prognostic | B | Supports Poor Outcome | 3 | accepted | EID2976Desmoid fibromatosis is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence. Beta-Catenin deregulation has been commonly identified in sporadic desmoids. CTNNB1 mutat… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC | civic |
| Imatinib | Desmoid FibromatosisALIAS | Predictive | B | Supports Sensitivity Response | 2 | submitted | EID11018Retrospective analysis of a phase 2 trial of imatinib in desmoid tumors. Among 33 evaluable patients,CTNBB1 T41A mutations were identified in 30,3%, S45 mutations were identified in 48.5 %, whereas C… (full text at CIViC) PMID 26861905 · Kasper et al., 2016 · Open in CIViC | civic |
| Meloxicam | Desmoid FibromatosisALIAS | Predictive | C | Does Not Support Sensitivity Response | 2 | accepted | EID6049Of the 33 patients with desmoid fibromatosis treated with meloxicam, a COX-2 selective inhibitor, one showed complete remission (CR), 7 partial remission (PR), 12 stable disease (SD), and 13 progressi… (full text at CIViC) PMID 24788118 · Hamada et al., 2014 · Open in CIViC | civic |
| Prognostic |
| B |
| Supports Better Outcome |
| 1 |
| accepted |
EID3043Desmoid fibromatosis is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence. Beta-Catenin deregulation has been commonly identified in sporadic desmoids. CTNNB1 mutat… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC |
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| Prognostic |
| B |
| Supports Better Outcome |
| 3 |
| accepted |
EID3044In an analysis of 138 desmoid fibromatosis tumors, which is a rare, nonmetastatic neoplasm marked by local invasiveness and relentless recurrence, 117 tumors (85%) had CTNNB1 mutations. Three discrete… (full text at CIViC) PMID 18832571 · Lazar et al., 2008 · Open in CIViC |
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| Celecoxib | Desmoid FibromatosisALIAS | Predictive | C | Supports Sensitivity Response | 2 | submitted | EID6048A 39-year-old man with soft-tissue mass between fifth and sixth rib on the right side. The entire mass was excised and an aggressive fibrosis was confirmed based on histopathology. Four months after s… (full text at CIViC) PMID 28881160 · Yang et al., 2017 · Open in CIViC | civic |