Cancer Family
Soft Tissue Neoplasm
CI-CAN-00000354Explore in graph →
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Cancer Family
CI-CAN-00000354Explore in graph →
Variants & evidence
382 evidence items mapped to this entity or its descendants, grouped by molecular profile, then therapy. 50 items per page.
| Therapy | Cancer | Type | Level | Direction · significance | Rating (1–5) | Status | Evidence | Source |
|---|---|---|---|---|---|---|---|---|
| CTNNB1 T41A1 | ||||||||
| Meloxicam | Desmoid FibromatosisALIAS | Predictive | B | Supports Sensitivity Response | 2 | submitted | EID6050Of the 33 patients with desmoid fibromatosis treated with meloxicam, a COX-2 selective inhibitor, one showed complete remission (CR), 7 partial remission (PR), 12 stable disease (SD), and 13 progressi… (full text at CIViC) PMID 24788118 · Hamada et al., 2014 · Open in CIViC | civic |
| ALK Fusion2 | ||||||||
| Crizotinib + PazopanibCombination | Inflammatory Myofibroblastic Tumor | Predictive | C | Supports Sensitivity Response | 3 | submitted | EID10932A patient with a recurrent, metastatic uterine myxoid neoplasm and a DCTN1-ALK fusion experienced both clinical and radiographic improvement with crizotinib and pazopanib. The patient was initially di… (full text at CIViC) PMID 26062823 · Subbiah et al., 2015 · Open in CIViC | civic |
| Entrectinib | Inflammatory Myofibroblastic Tumor | Predictive | C | Supports Sensitivity Response | 3 | accepted | EID11856In a phase 1/2 trial of entrectinib in pediatric patients, tumors with fusions in NTRK, ROS1, or ALK had an overall response (ORR) of 57.7% (95% CI; 36.9-76.7). This included a patient with inflammat… (full text at CIViC) PMID 35395680 · Desai et al., 2022 · Open in CIViC | civic |
| DICER1 Loss-of-function1 | ||||||||
| (predisposing) | Anaplastic Sarcoma of the Kidney | Predisposing | B | Supports Predisposition | 2 | submitted | EID11473Analysis of DICER1 mutations in tumor/normal pairs from pediatric patients (7 months to 13 yo) with anaplastic sarcoma of the kidney identified a somatic RNase IIIb DICER1 mutation in 8 of 9 cases (89… (full text at CIViC) PMID 28862265 · Wu et al., 2018 · Open in CIViC | civic |
| DICER1 RNase IIIb Mutation1 | ||||||||
| (oncogenic) | Anaplastic Sarcoma of the Kidney | Oncogenic | D | Supports Oncogenicity | 2 | submitted | EID11472An analysis of DICER1 mutations in anaplastic sarcoma of the kidney identified RNase IIIb DICER1 mutations in 8 of 9 cases (89%). An in vitro cleavage assay of miR122 demonstrated that three of the DI… (full text at CIViC) PMID 28862265 · Wu et al., 2018 · Open in CIViC | civic |
| DICER1 Loss-of-function + DICER1 RNase IIIb Mutation1 | ||||||||
| (diagnostic) | Anaplastic Sarcoma of the Kidney | Diagnostic | B | Supports Positive | 4 | submitted | EID11471Analysis of DICER1 mutations in tumor/normal pairs from pediatric patients (7 months to 13 yo) with anaplastic sarcoma of the kidney identified at least 1 RNase IIIb DICER1 mutation in 8 of 9 cases (… (full text at CIViC) PMID 28862265 · Wu et al., 2018 · Open in CIViC | civic |
| BRAF Fusion1 | ||||||||
| (oncogenic) | Lipofibromatosis | Oncogenic | C | Supports Oncogenicity | 2 | submitted | EID11020This study, involving 20 pediatric patients, looked at molecular alterations in Lipofibromatosis. RNA sequencing detected EGFR::BRAF fusion in Patient 19 (6-year-old male). The fusion was picked up by… (full text at CIViC) PMID 30310176 · Al-Ibraheemi et al., 2019 · Open in CIViC | civic |
| PDGFD Fusion1 | ||||||||
| (diagnostic) | Dermatofibrosarcoma Protuberans | Diagnostic | C | Supports Positive | 3 | submitted | EID11732In a cohort of 20 patients with dermatofibrosarcoma protuberans that were previously negative for COL1A1::PDGFB fusion with fluorescence in situ hybridization, RNA-sequencing was applied. novel and re… (full text at CIViC) PMID 29955147 · Dadone-Montaudié et al., 2018 · Open in CIViC | civic |
| NTRK3 Fusion1 | ||||||||
| (oncogenic) | Cervical Sarcoma | Oncogenic | C | Supports Oncogenicity | 1 | accepted | EID10483A 33-year-old Han Chinese woman has been associated with an NTRK fusion cervical sarcoma which was positive for Pan-TRK by immunohistochemistry (IHC) analysis. However, FISH for NTRK1 was negative. Th… (full text at CIViC) PMID 35572973 · Dang et al., 2022 · Open in CIViC | civic |
| NTRK3 Fusion2 | ||||||||
| (diagnostic) | Anaplastic Sarcoma of the Kidney | Diagnostic | C | Does Not Support Negative | 1 | submitted | EID10421In 4 cases of Anaplastic sarcoma of the kidney ETV6::NTRK3 fusion was negative. PMID 17895746 · Vujanić et al., 2007 · Open in CIViC | civic |
| Entrectinib | Gastrointestinal Stromal Tumor | Predictive | C | Supports Sensitivity Response | 2 | submitted | EID12527Plasma ctDNA analysis detected an ETV6:NTRK3 fusion (described by the authors as "ETV6 exon4:NTRK3 exon14" at a VAF of 35.3%) in a female patient with recurrent GIST. Entrectinib therapy (600 mg daily… (full text at CIViC) PMID 40900786 · Dong et al., 2025 · Open in CIViC | civic |
| ATF1 Fusion5 | ||||||||
| (diagnostic) | Clear Cell Sarcoma of Soft TissueALIAS | Diagnostic | B | Supports Positive | 4 | accepted | EID8265In this study, the authors analyzed 17 clear cell sarcomas from 16 patients, along with 2 positive control cell lines and 2 melanomas as negative controls, to investigate the prevalence and types of E… (full text at CIViC) PMID 19561568 · Wang et al., 2009 · Open in CIViC | civic |
| 〃 | Clear Cell Sarcoma of Soft TissueALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID12829In this 2018 study by Keiko Segawa et al., the authors analyzed 22 tumors, including 16 clear cell sarcomas of soft tissue (CCSST) and 6 clear cell sarcoma–like gastrointestinal tumors (CCSLGT), to ch… (full text at CIViC) PMID 30219084 · Segawa et al., 2018 · Open in CIViC | civic |
| 〃 | Clear Cell Sarcoma of Soft TissueALIAS | |||||||
| CREB1 Fusion4 | ||||||||
| (diagnostic) | Angiomatoid Fibrous Histiocytoma | Diagnostic | B | Supports Positive | 3 | accepted | EID12852In this study, the authors analyzed 14 cases of angiomatoid fibrous histiocytoma (AFH). The EWSR1::CREB1 fusion associated with t(2;22)(q33;q12) was detected in 13 of 14 tumors by dual‑color and four‑… (full text at CIViC) PMID 18094413 · Rossi et al., 2007 · Open in CIViC | civic |
| 〃 | Angiomatoid Fibrous Histiocytoma | Diagnostic | B | Supports Positive | 3 | accepted | EID12855In this study, the authors analyzed 9 cases of angiomatoid fibrous histiocytoma (AFH). The EWSR1::CREB1 fusion was identified as the predominant molecular alteration, detected in 8 of 9 tumors by RT‑P… (full text at CIViC) PMID 17724745 · Antonescu et al., 2007 · Open in CIViC | civic |
| 〃 | Angiomatoid Fibrous Histiocytoma | Diagnostic | C | Supports Positive | ||||
| EWSR1 Fusion1 | ||||||||
| (diagnostic) | Myoepithelial TumorALIAS | Diagnostic | A | Supports Positive | 4 | rejected | EID12932Drawing on previously published large case series and molecular studies, in this 2015 review the authors summarized clinicopathologic, immunophenotypic, and genetic features of myoepithelial neoplasms… (full text at CIViC) PMID 25804378 · Jo et al., 2015 · Open in CIViC | civic |
| KLF15 Fusion1 | ||||||||
| (diagnostic) | Myoepithelial TumorALIAS | Diagnostic | C | Supports Positive | 3 | accepted | EID12930In this case report the authors described a myoepithelial carcinoma of soft tissue in a 7-week-old female infant. The tumor was located ventral to the right shoulder and measured 25 mm in diameter. Hi… (full text at CIViC) PMID 33734915 · Bodis et al., 2021 · Open in CIViC | civic |
| NR4A3 Fusion2 | ||||||||
| Pazopanib | Extraskeletal Myxoid Chondrosarcoma | Predictive | B | Supports Sensitivity Response | 3 | submitted | EID9819In this single-arm, open-label phase 2 trial, extraskeletal myxoid chondrosarcoma patients treated with pazopanib were reported and 22/23 patients (one patient died before the primary analysis) were e… (full text at CIViC) PMID 31331701 · Stacchiotti et al., 2019 · Open in CIViC | civic |
| Sunitinib | Extraskeletal Myxoid Chondrosarcoma | Predictive | B | Supports Sensitivity Response | 3 | submitted | EID6378his report confirms the therapeutic activity of sunitinib in extraskeletal myxoid chondrosarcoma. Genotype/phenotype analyses support a correlation between response and EWSR1-NR4A3 fusion. PMID 24703573 · Stacchiotti et al., 2014 · Open in CIViC | civic |
| NR4A3 Fusion + NR4A3 Fusion1 | ||||||||
| Trabectedin | Extraskeletal Myxoid Chondrosarcoma | Predictive | C | Supports Sensitivity Response | 2 | accepted | EID12545In a sub-analysis of a randomized phase II trial in extraskeletal myxoid chondrosarcoma (EWSR1-NR4A3 and TAF15-NR4A3 fusions; n = 2) and mesenchymal chondrosarcoma (HEY1-NCOA2 fusion, n = 6)(trabected… (full text at CIViC) PMID 27418251 · Morioka et al., 2016 · Open in CIViC | civic |
| EWSR1 Fusion4 | ||||||||
| (diagnostic) | Myoepithelial TumorALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID12926The authors performed retrospective analysis of 66 myoepithelial (ME) tumors arising outside the salivary glands, including soft tissue, bone, and visceral lesions. The cohort included 36 females and … (full text at CIViC) PMID 20815032 · Antonescu et al., 2010 · Open in CIViC | civic |
| 〃 | Myoepithelial TumorALIAS | Diagnostic | B | Supports Positive | 3 | accepted | EID12927In this 2024 study, the authors analyzed 40 myoepithelial tumors of soft tissue and bone arising in patients ≤21 years of age. The cohort included 22 females and 18 males, with ages ranging from 3 mon… (full text at CIViC) PMID 38782103 · Logan et al., 2024 · Open in CIViC | civic |
| 〃 | Myoepithelial TumorALIAS | |||||||
| WT1 Fusion3 | ||||||||
| (diagnostic) | Desmoplastic Small Round Cell Tumor | Diagnostic | B | Supports Positive | 2 | accepted | EID11405In an analysis of a cohort of desmoplastic small round cell tumor, evidence of a functional EWSR1::WT1 fusion was detected in 25 of 26 cases. In these cases, the genomic breakpoints in WT1 was in in… (full text at CIViC) PMID 9738572 · Gerald et al., 1998 · Open in CIViC | civic |
| 〃 | Desmoplastic Small Round Cell Tumor | Diagnostic | B | Supports Positive | 2 | accepted | EID11406In an analysis of 6 desmoplastic small round cell tumors, chimeric EWSR1::WT1 transcripts were detected in 4. The translocation resulted in an in-frame fusion of the N terminus (first 7 exons) of EWS… (full text at CIViC) PMID 7862627 · Gerald et al., 1995 · Open in CIViC | civic |
| 〃 | Desmoplastic Small Round Cell Tumor | Diagnostic | C | Supports Positive | ||||
| ALK Fusion1 | ||||||||
| Lorlatinib | Inflammatory Myofibroblastic Tumor | Predictive | C | Supports Sensitivity Response | 3 | submitted | EID11292This case study was on a 43-year-old female patient with an FN1-ALK gene fusion. In several case reports and phase 1b/phase 2 studies, responses of ALK-positive IMTs to crizotinib have been shown. Cri… (full text at CIViC) PMID 33007314 · Reinhart et al., 2020 · Open in CIViC | civic |
| ROS1 Fusion1 | ||||||||
| (oncogenic) | Inflammatory Myofibroblastic Tumor | Oncogenic | C | Supports Oncogenicity | 2 | submitted | EID12611In the STARTRK-NG Phase 1/2 trial of entrectinib in pediatric patients, with extracranial solid tumors or primary CNS tumors, aged <22 years with relapsed or refractory disease, tumors with fusions… (full text at CIViC) PMID 35395680 · Desai et al., 2022 · Open in CIViC | civic |
| WWTR1 Fusion1 | ||||||||
| (diagnostic) | Pseudomyogenic Hemangioendothelioma | Diagnostic | C | Supports Positive | 4 | accepted | EID12752In this study, the authors investigated a case of pseudomyogenic hemangioendothelioma in a 33-year-old woman presenting with multifocal lytic bone lesions. Previous studies had demonstrated recurrent … (full text at CIViC) PMID 31243110 · Panagopoulos et al., 2019 · Open in CIViC | civic |
| KDR Overexpression1 | ||||||||
| Sunitinib | Breast Angiosarcoma | Predictive | C | Supports Sensitivity Response | 3 | submitted | EID5910gene expression assay performed earlier demonstrated a This case report of a patient with refractory breast angiosarcoma shows a potential therapeutic benefit of sunitinib due to the upregulation of V… (full text at CIViC) PMID 25639617 · Silva et al., 2015 · Open in CIViC | civic |
| ALK Fusion1 | ||||||||
| Entrectinib | Inflammatory Myofibroblastic Tumor | Predictive | C | Supports Sensitivity Response | 1 | submitted | EID12610In the STARTRK-NG Phase 1/2 trial of entrectinib in pediatric patients, with extracranial solid tumors or primary CNS tumors, aged <22 years with relapsed or refractory disease, tumors with fusions… (full text at CIViC) PMID 35395680 · Desai et al., 2022 · Open in CIViC | civic |
| KIT 557/558 in-frame deletion/delins1 | ||||||||
| Imatinib | Gastrointestinal Stromal Tumor | Predictive | B | Supports Reduced Sensitivity | 3 | submitted | EID12935Gastrointestinal stromal tumor patients with KIT exon 11 mutations were stratified based on the location of their pathogenic variant in exon 11 and those with a deletion or deletion/insertion of codon… (full text at CIViC) PMID 33673554 · Incorvaia et al., 2021 · Open in CIViC | civic |
| KIT A502_Y503dup2 | ||||||||
| Imatinib + Ponatinib + RegorafenibSubstitutes | Gastrointestinal Stromal Tumor | Predictive | D | Does Not Support Sensitivity Response | 3 | accepted | EID4630In an in vitro study, an IL-3-independent Ba/F3 cell line expressing the KIT exon 9 A502_Y503dup primary activating mutation demonstrated reduced sensitivity to regorafenib (IC50: 138 nmol/L), imatini… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC | civic |
| Sunitinib | Gastrointestinal Stromal Tumor | Predictive | D | Supports Sensitivity Response | 3 | submitted | EID4506In an in vitro study, a Ba/F3 cell line expressing KIT A502_Y503dup (502AY in the paper) mutation (overexpression) demonstrated sensitivity to sunitinib treatment (IC50: 5nM) similar to Ba/F3 cells ex… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC | civic |
| KIT A829P3 | ||||||||
| Ponatinib | Gastrointestinal Stromal Tumor | Predictive | D | Does Not Support Resistance | 4 | accepted | EID7413Ponatinib possesses potent activity against A829P KIT mutant cells in preclinical experiments. A preclinical study tested the effect of a tyrosine kinase inhibitor (TKI) on Ba/F3 cell lines with repre… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC | civic |
| 〃 | Gastrointestinal Stromal Tumor | Predictive | D | Supports Sensitivity Response | 3 | submitted | EID5862Ponatinib possesses potent activity against most major clinically-relevant KIT mutants, and has demonstrated preliminary evidence of activity in patients with refractory GIST. These data strongly supp… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC | civic |
| Imatinib + SunitinibSubstitutes | Gastrointestinal Stromal Tumor | Predictive | D | |||||
| KIT A829P + KIT V560_Y578del1 | ||||||||
| Imatinib + SunitinibSubstitutes | Gastrointestinal Stromal Tumor | Predictive | D | Supports Resistance | 3 | submitted | EID12467Patient-derived GIST-T1/829 cells with driver mutation KIT 560-578 deletion and secondary KIT A829P mutations were tested for TKI responsiveness. 560-578del and A829P cells (Sunitinib IC50: 1168 nM an… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC | civic |
| KIT C809G1 | ||||||||
| Imatinib | Gastrointestinal Stromal Tumor | Predictive | C | Supports Resistance | 3 | accepted | EID2920147 patients with advanced, unresectable GISTs were enrolled onto a randomized, phase II clinical study of imatinib (CSTI571-B2222). Specimens from 43 pretreatment and/or imatinib-resistant tumors wer… (full text at CIViC) PMID 16954519 · Heinrich et al., 2006 · Open in CIViC | civic |
| KIT D419del2 | ||||||||
| (predisposing) | Gastrointestinal Stromal Tumor | Predisposing | C | N/A N/A | 3 | submitted | EID9295A novel germline KIT variant, D419del, was discovered in a family with mastocytosis. Case 1, a 60 year old German woman, also had a gastrointestinal stromal tumor (GIST) and dysphagia. Case 2, her 38 … (full text at CIViC) PMID 16143141 · Hartmann et al., 2005 · Open in CIViC | civic |
| Imatinib | Gastrointestinal Stromal Tumor | Predictive | D | Supports Sensitivity Response | 3 | submitted | EID1962Family with both familial GISTs and mastocytosis expressed a novel germline KIT mutation in exon 8 (p.419del) affecting the extracellular domain of KIT. This mutation activates KIT, and the mutant KIT… (full text at CIViC) PMID 16143141 · Hartmann et al., 2005 · Open in CIViC | civic |
| KIT D579del3 | ||||||||
| Imatinib | Gastrointestinal Stromal Tumor | Predictive | D | Supports Sensitivity Response | — | submitted | EID2485Molecular models predict that deletion of a portion of the juxtamembrane domain relieves steric hindrance and results in higher binding affinity for imatinib. PMID 21364689 · Pierotti et al., 2011 · Open in CIViC | civic |
| Sunitinib | Gastrointestinal Stromal Tumor | Predictive | C | Supports Resistance | 2 | accepted | EID4142Patient 74 from a larger cohort of genotyped patients (n= 78) with imatinib resistant or intolerant gastrointestinal stromal tumors (GISTs) harbored a primary (pre-imatinib treatment) KIT D579 deletio… (full text at CIViC) PMID 18955458 · Heinrich et al., 2008 · Open in CIViC | civic |
| 〃 | Gastrointestinal Stromal Tumor | Predictive | C | Supports Resistance | — | submitted | ||
Data updated 9 hours agoSource updated unknownsource: civic (CC0)
Evidence levels, directions and ratings are those assigned by CIViC curators. "Submitted" items have not completed curation review. This is not treatment guidance.
| Diagnostic |
| B |
| Supports Positive |
| 3 |
| accepted |
EID12830In this 2002 study by Cristina R Antonescu et al., 12 histologically confirmed cases of clear cell sarcoma (CCS) arising in the deep soft tissues of the extremities were analyzed to assess the prevale… (full text at CIViC) PMID 11826187 · Antonescu et al., 2002 · Open in CIViC |
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| Crizotinib | Clear Cell Sarcoma of Soft TissueALIAS | Predictive | B | Supports Sensitivity Response | 2 | submitted | EID7931Phase 2 clinical trial tested crizotinib in clear-cell sarcoma (CCSA) patients. Patients were grouped by presence (MET+) or absence (MET-) of the EWSR1 rearrangement. Objective PR observed in 1/26 M… (full text at CIViC) PMID 29741569 · Schöffski et al., 2019 · Open in CIViC | civic |
| Trabectedin | Clear Cell Sarcoma of Soft TissueALIAS | Predictive | C | Supports Sensitivity Response | 3 | submitted | EID12166This case describes the treatment of a patient with a malignant gastrointestinal neuroectodermal tumour (GNET) harbouring an EWSR1-ATF1 fusion, initially treated with chemotherapy and radiotherapy. Af… (full text at CIViC) PMID 38074516 · Galera et al., 2023 · Open in CIViC | civic |
| 3 |
| accepted |
EID12853In this study, the authors report a 34‑year-old patient with angiomatoid fibrous histiocytoma (AFH) who initially presented with a pulmonary nodule and a 4th‑rib lesion and subsequently developed meta… (full text at CIViC) PMID 39845329 · Feng et al., 2024 · Open in CIViC |
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| (prognostic) | Angiomatoid Fibrous Histiocytoma | Prognostic | C | Supports Poor Outcome | 1 | rejected | EID12854The EWSR1::CREB1 fusion associated with t(2;22)(q33;q12) represents a defining diagnostic alteration in angiomatoid fibrous histiocytoma (AFH); in this case, a 34‑year‑old patient initially presented … (full text at CIViC) PMID 39845329 · Feng et al., 2024 · Open in CIViC | civic |
| Diagnostic |
| B |
| Supports Positive |
| 3 |
| accepted |
EID12929In this 2011 study the authors analyzed 18 cutaneous myoepithelial tumors arising in 7 female and 11 male patients, with a median age of 56 years (range 34–86 years). Tumors included 9 mixed tumors, 8… (full text at CIViC) PMID 21725291 · Flucke et al., 2011 · Open in CIViC |
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| 〃 | Myoepithelial TumorALIAS | Diagnostic | C | Supports Positive | 3 | accepted | EID12931In this report the authors described a 9-year-old boy with a myoepithelioma arising in the right posterior mediastinum. The tumor’s deep location is exceptionally rare, with only four well-documented … (full text at CIViC) PMID 36190002 · Du et al., 2022 · Open in CIViC | civic |
| 2 |
| accepted |
EID11407Molecular analysis of desmoplastic small round cell tumors with recurrent translocation, t(11;22) (p13;q12) identified EWSR1 on 22q12 and WT1 on 11p13 as the genes involved in the rearrangement. Furt… (full text at CIViC) PMID 8187063 · Ladanyi et al., 1994 · Open in CIViC |
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| Supports Resistance |
| 4 |
| accepted |
EID7415Several preclinical studies tested the effects of various tyrosine kinase inhibitors (TKIs) on Ba/F3 cell lines with representative primary sunitinib and imatinib sensitizing mutation del 557-558, whi… (full text at CIViC) PMID 25239608 · Garner et al., 2014 · Open in CIViC |
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EID4143In a retrospective study of 1124 sunitinib-treated gastrointestinal stromal tumor patients, patients with primary KIT exon 11 mutations (n=143) were associated with decreased progression free surviva… (full text at CIViC) PMID 26772734 · Reichardt et al., 2016 · Open in CIViC |
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