Subtype
Small Cell Neuroendocrine Carcinoma
CI-CAN-00003964SCNECExplore in graph →
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Subtype
CI-CAN-00003964SCNECExplore in graph →
Genomics
4 cohorts mapped to this entity or its descendants. Each frequency is affected / profiled within one cohort; cohorts are shown separately because case selection, sequencing depth and definitions differ. By default the cohort with the most cases profiled is shown.
29 cases with simple somatic mutation data · 29 cases total · 2026-01-13 · mapped to Lung Small Cell Carcinoma EXACT_IDENTIFIER
| # | Gene | Alteration | Affected (n) | Profiled (n) | Frequency (%) | Source |
|---|---|---|---|---|---|---|
| 1 | TP53 | Ssm | 26 | 29 | 89.7% | cbioportal |
| 2 | RB1 | Ssm | 19 | 29 | 65.5% | cbioportal |
| 3 | LRP1B | Ssm | 13 | 29 | 44.8% | cbioportal |
| 4 | USH2A | Ssm | 13 | 29 | 44.8% | cbioportal |
| 5 | TTN | Ssm | 11 | 29 | 37.9% | cbioportal |
| 7 | PKHD1 | Ssm | 10 | 29 | 34.5% | cbioportal |
| 6 | CSMD3 | Ssm | 10 | 29 | 34.5% | cbioportal |
| 8 | COL11A1 |
Data updated 22 days agoSource updated 2026-01-13
80 cases with simple somatic mutation data · 80 cases total · 2026-01-13 · mapped to Lung Small Cell Carcinoma EXACT_IDENTIFIER
| # | Gene | Alteration | Affected (n) | Profiled (n) | Frequency (%) | Source |
|---|---|---|---|---|---|---|
| 1 | TP53 |
20 cases with simple somatic mutation data · 20 cases total · 2026-01-13 · mapped to Lung Small Cell Carcinoma EXACT_IDENTIFIER
| # | Gene | Alteration | Affected (n) | Profiled (n) | Frequency (%) | Source |
|---|---|---|---|---|---|---|
| 1 | POLE |
120 cases with simple somatic mutation data · 120 cases total · 2026-01-13 · mapped to Lung Small Cell Carcinoma EXACT_IDENTIFIER
| # | Gene | Alteration | Affected (n) | Profiled (n) | Frequency (%) | Source |
|---|---|---|---|---|---|---|
| 1 | TP53 |
Cohorts mapped to a descendant (e.g. a subtype) are included because their cases belong to this entity by definition; the mapping and its match type are shown per cohort.
| Ssm |
| 9 |
| 29 |
| 31% |
| cbioportal |
| 10 | PRDM9 | Ssm | 9 | 29 | 31% | cbioportal |
| 9 | MUC17 | Ssm | 9 | 29 | 31% | cbioportal |
| 13 | SYNE1 | Ssm | 8 | 29 | 27.6% | cbioportal |
| 12 | SPHKAP | Ssm | 8 | 29 | 27.6% | cbioportal |
| 11 | DMD | Ssm | 8 | 29 | 27.6% | cbioportal |
| 15 | ZNF536 | Ssm | 8 | 29 | 27.6% | cbioportal |
| 14 | ZNF521 | Ssm | 8 | 29 | 27.6% | cbioportal |
| 22 | ZNF804A | Ssm | 7 | 29 | 24.1% | cbioportal |
| 20 | TMEM132D | Ssm | 7 | 29 | 24.1% | cbioportal |
| 19 | TKTL2 | Ssm | 7 | 29 | 24.1% | cbioportal |
| 18 | SI | Ssm | 7 | 29 | 24.1% | cbioportal |
| 17 | FLG | Ssm | 7 | 29 | 24.1% | cbioportal |
| 16 | CSMD2 | Ssm | 7 | 29 | 24.1% | cbioportal |
| 21 | TNN | Ssm | 7 | 29 | 24.1% | cbioportal |
| 30 | HCN1 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 23 | ANKRD30A | Ssm | 6 | 29 | 20.7% | cbioportal |
| 24 | CDH10 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 25 | COL22A1 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 26 | DNAH9 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 27 | ERBB4 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 28 | ERICH3 | Ssm | 6 | 29 | 20.7% | cbioportal |
| 29 | FAT4 | Ssm | 6 | 29 | 20.7% | cbioportal |
| Ssm |
| 36 |
| 80 |
| 45% |
| cbioportal |
| 2 | RB1 | Ssm | 19 | 80 | 23.8% | cbioportal |
| 3 | CSMD3 | Ssm | 17 | 80 | 21.3% | cbioportal |
| 4 | TTN | Ssm | 16 | 80 | 20% | cbioportal |
| 5 | LRP1B | Ssm | 15 | 80 | 18.8% | cbioportal |
| 6 | MUC17 | Ssm | 12 | 80 | 15% | cbioportal |
| 7 | HCN1 | Ssm | 11 | 80 | 13.8% | cbioportal |
| 8 | USH2A | Ssm | 11 | 80 | 13.8% | cbioportal |
| 9 | DNAH7 | Ssm | 10 | 80 | 12.5% | cbioportal |
| 10 | COL11A1 | Ssm | 9 | 80 | 11.3% | cbioportal |
| 11 | COL22A1 | Ssm | 9 | 80 | 11.3% | cbioportal |
| 12 | SYNE1 | Ssm | 9 | 80 | 11.3% | cbioportal |
| 13 | BRINP3 | Ssm | 8 | 80 | 10% | cbioportal |
| 14 | GRIN2B | Ssm | 8 | 80 | 10% | cbioportal |
| 23 | NAV3 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 24 | PKHD1 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 25 | RYR2 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 17 | ERICH3 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 16 | DNAH5 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 15 | ANK2 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 18 | FAM135B | Ssm | 7 | 80 | 8.8% | cbioportal |
| 19 | FSIP2 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 20 | KIF21A | Ssm | 7 | 80 | 8.8% | cbioportal |
| 21 | MORC1 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 22 | MYH2 | Ssm | 7 | 80 | 8.8% | cbioportal |
| 30 | DIP2C | Ssm | 6 | 80 | 7.5% | cbioportal |
| 29 | DCC | Ssm | 6 | 80 | 7.5% | cbioportal |
| 28 | COL4A2 | Ssm | 6 | 80 | 7.5% | cbioportal |
| 27 | CNTNAP2 | Ssm | 6 | 80 | 7.5% | cbioportal |
| 26 | ADGRG4 | Ssm | 6 | 80 | 7.5% | cbioportal |
Data updated 22 days agoSource updated 2026-01-13
| Ssm |
| 20 |
| 20 |
| 100% |
| cbioportal |
| 3 | GRIN2C | Ssm | 19 | 20 | 95% | cbioportal |
| 2 | CUBN | Ssm | 19 | 20 | 95% | cbioportal |
| 9 | MUC16 | Ssm | 18 | 20 | 90% | cbioportal |
| 8 | GART | Ssm | 18 | 20 | 90% | cbioportal |
| 7 | FSIP2 | Ssm | 18 | 20 | 90% | cbioportal |
| 10 | OR10Q1 | Ssm | 18 | 20 | 90% | cbioportal |
| 6 | DGKG | Ssm | 18 | 20 | 90% | cbioportal |
| 5 | DBN1 | Ssm | 18 | 20 | 90% | cbioportal |
| 4 | CATSPERT | Ssm | 18 | 20 | 90% | cbioportal |
| 13 | PIKFYVE | Ssm | 17 | 20 | 85% | cbioportal |
| 12 | OBSCN | Ssm | 17 | 20 | 85% | cbioportal |
| 11 | IGLV1-47 | Ssm | 17 | 20 | 85% | cbioportal |
| 18 | AHNAK | Ssm | 16 | 20 | 80% | cbioportal |
| 17 | ADGRG6 | Ssm | 16 | 20 | 80% | cbioportal |
| 30 | C4ORF36 | Ssm | 16 | 20 | 80% | cbioportal |
| 15 | ABCB11 | Ssm | 16 | 20 | 80% | cbioportal |
| 14 | ABCA6 | Ssm | 16 | 20 | 80% | cbioportal |
| 16 | ADAM22 | Ssm | 16 | 20 | 80% | cbioportal |
| 29 | BCL2L2 | Ssm | 16 | 20 | 80% | cbioportal |
| 28 | B3GALT5-AS1 | Ssm | 16 | 20 | 80% | cbioportal |
| 27 | ATP11A | Ssm | 16 | 20 | 80% | cbioportal |
| 26 | ATG2B | Ssm | 16 | 20 | 80% | cbioportal |
| 25 | ARMC9 | Ssm | 16 | 20 | 80% | cbioportal |
| 24 | ARHGAP22 | Ssm | 16 | 20 | 80% | cbioportal |
| 23 | AP3B1 | Ssm | 16 | 20 | 80% | cbioportal |
| 22 | ANTXR2 | Ssm | 16 | 20 | 80% | cbioportal |
| 21 | ANKS6 | Ssm | 16 | 20 | 80% | cbioportal |
| 20 | AKAP9 | Ssm | 16 | 20 | 80% | cbioportal |
| 19 | AHNAK2 | Ssm | 16 | 20 | 80% | cbioportal |
Data updated 22 days agoSource updated 2026-01-13
| Ssm |
| 103 |
| 120 |
| 85.8% |
| cbioportal |
| 2 | RB1 | Ssm | 87 | 120 | 72.5% | cbioportal |
| 3 | TTN | Ssm | 77 | 120 | 64.2% | cbioportal |
| 4 | RYR2 | Ssm | 54 | 120 | 45% | cbioportal |
| 5 | LRP1B | Ssm | 51 | 120 | 42.5% | cbioportal |
| 6 | MUC16 | Ssm | 49 | 120 | 40.8% | cbioportal |
| 7 | ZFHX4 | Ssm | 46 | 120 | 38.3% | cbioportal |
| 8 | USH2A | Ssm | 44 | 120 | 36.7% | cbioportal |
| 9 | CSMD3 | Ssm | 42 | 120 | 35% | cbioportal |
| 10 | NAV3 | Ssm | 35 | 120 | 29.2% | cbioportal |
| 11 | PCDH15 | Ssm | 32 | 120 | 26.7% | cbioportal |
| 12 | COL11A1 | Ssm | 31 | 120 | 25.8% | cbioportal |
| 13 | CSMD1 | Ssm | 28 | 120 | 23.3% | cbioportal |
| 14 | EYS | Ssm | 27 | 120 | 22.5% | cbioportal |
| 15 | MUC17 | Ssm | 27 | 120 | 22.5% | cbioportal |
| 16 | SYNE1 | Ssm | 27 | 120 | 22.5% | cbioportal |
| 17 | ANKRD30B | Ssm | 26 | 120 | 21.7% | cbioportal |
| 18 | FAM135B | Ssm | 26 | 120 | 21.7% | cbioportal |
| 19 | FSIP2 | Ssm | 25 | 120 | 20.8% | cbioportal |
| 20 | TMEM132D | Ssm | 25 | 120 | 20.8% | cbioportal |
| 21 | ERICH3 | Ssm | 24 | 120 | 20% | cbioportal |
| 22 | PKHD1 | Ssm | 24 | 120 | 20% | cbioportal |
| 23 | SI | Ssm | 24 | 120 | 20% | cbioportal |
| 24 | PKHD1L1 | Ssm | 23 | 120 | 19.2% | cbioportal |
| 25 | RYR1 | Ssm | 23 | 120 | 19.2% | cbioportal |
| 26 | SPTA1 | Ssm | 23 | 120 | 19.2% | cbioportal |
| 27 | TENM1 | Ssm | 23 | 120 | 19.2% | cbioportal |
| 28 | XIRP2 | Ssm | 23 | 120 | 19.2% | cbioportal |
| 29 | ADGB | Ssm | 22 | 120 | 18.3% | cbioportal |
| 30 | FAT3 | Ssm | 22 | 120 | 18.3% | cbioportal |
Data updated 22 days agoSource updated 2026-01-13