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Ponatinib inhibits polyclonal drug-resistant KIT oncoproteins and shows therapeutic potential in heavily pretreated gastrointestinal stromal tumor (GIST) patients.

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Clin Cancer Res2014PMID 25239608PMC4233175stubpubmedProvenance
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PubMed
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Sep 8, 2026
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normalized (units and labels harmonized; values unchanged)
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ING-CIVIC-20260908-000001
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Abstract

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Linked entities (24)

How each link was made (MeSH, dictionary, registry reference, curation…) and whether it has been validated. Candidate links are not counted in entity statistics.

Validated 24

Curated evidence

Evidence citing this paper (43)

civicProvenance
Source
CIViC — Clinical Interpretation of Variants in Cancer
Dataset
CIViC evidence items
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civic-2026-09-08
Retrieved
Sep 8, 2026
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normalized (units and labels harmonized; values unchanged)
Evidence
expert curation
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CC0 1.0
PMID
25239608
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ING-CIVIC-20260908-000001
Open at source
CuratedShowing 1–43 of 43 evidence items · levels, directions and significance as curated at the source; each row links to its CIViC record.
TherapyCancerTypeLevelDirection · significanceRating (1–5)StatusEvidenceSource
KIT A502_Y503dup2
Imatinib + Ponatinib + RegorafenibSubstitutesGastrointestinal Stromal TumorPredictiveDDoes Not Support Sensitivity Response3accepted
EID4630

In an in vitro study, an IL-3-independent Ba/F3 cell line expressing the KIT exon 9 A502_Y503dup primary activating mutation demonstrated reduced sensitivity to regorafenib (IC50: 138 nmol/L), imatini… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
SunitinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3submitted
EID4506

In an in vitro study, a Ba/F3 cell line expressing KIT A502_Y503dup (502AY in the paper) mutation (overexpression) demonstrated sensitivity to sunitinib treatment (IC50: 5nM) similar to Ba/F3 cells ex… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT A829P3
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3submitted
EID5862

Ponatinib possesses potent activity against most major clinically-relevant KIT mutants, and has demonstrated preliminary evidence of activity in patients with refractory GIST. These data strongly supp… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
〃Gastrointestinal Stromal TumorPredictiveDDoes Not Support Resistance4accepted
EID7413

Ponatinib possesses potent activity against A829P KIT mutant cells in preclinical experiments. A preclinical study tested the effect of a tyrosine kinase inhibitor (TKI) on Ba/F3 cell lines with repre… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Imatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Resistance4accepted
EID7415

Several preclinical studies tested the effects of various tyrosine kinase inhibitors (TKIs) on Ba/F3 cell lines with representative primary sunitinib and imatinib sensitizing mutation del 557-558, whi… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT A829P + KIT V560_Y578del1
Imatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Resistance3submitted
EID12467

Patient-derived GIST-T1/829 cells with driver mutation KIT 560-578 deletion and secondary KIT A829P mutations were tested for TKI responsiveness. 560-578del and A829P cells (Sunitinib IC50: 1168 nM an… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D816E1
Imatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Resistance4accepted
EID4631

Several preclinical studies were done in order to test the effects of various tyrosine kinase inhibitors (TKIs) on KIT-mutant cell lines derived from Gastrointestinal Stromal Tumor (GIST) patients wit… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D816E + KIT V560_Y578del1
PonatinibGastrointestinal Stromal TumorPredictiveDDoes Not Support Resistance4accepted
EID7401

A preclinical study was done in order to test the effects of a tyrosine kinase inhibitor (TKI) on the ponatinib-sensitive KIT-mutant cell line GIST-T1 derived from Gastrointestinal Stromal Tumor (GIST… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D816G2
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4submitted
EID7410

Ponatinib possesses potent activity against D816G KIT mutant in preclinical experiments.

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
RegorafenibGastrointestinal Stromal TumorPredictiveDSupports Resistance2submitted
EID4157

In an in vitro study, a Ba/F3 cell line expressing KIT W557_K558del primary mutation (known to confer sensitivity to regorafenib) and KIT D816G secondary mutation, KIT D816G was associated with decrea… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D816H2
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4submitted
EID7409

Ponatinib possesses potent activity against D816H KIT mutant in preclinical experiments.

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
RegorafenibGastrointestinal Stromal TumorPredictiveDSupports Resistance3submitted
EID4152

In an in vitro study, Ba/F3 cell lines expressing different KIT primary mutations (known to confer sensitivity to regorafenib) and KIT D816H secondary mutation, KIT D816H was associated with decreased… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D816Y1
Ponatinib + Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Resistance2submitted
EID4156

In an in vitro study, a Ba/F3 cell line expressing KIT 557-558del primary mutation (known to confer sensitivity to regorafenib) was incubated in various concentrations of ponatinib, sunitinib, or rego… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D820A2
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4submitted
EID7411

In an in vitro study, Ba/F3 cell lines expressing KIT primary mutations and KIT D820A secondary mutation, KIT D820A was associated with similar sensitivity to ponatinib treatment compared to Ba/F3 cel… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
RegorafenibGastrointestinal Stromal TumorPredictiveDSupports Resistance3submitted
EID4164

In an in vitro study, a Ba/F3 cell line expressing KIT W557_K558del primary mutation (known to confer sensitivity to regorafenib) and KIT D820A secondary mutation, KIT D820A was associated with decrea… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT K550_W557del1
Imatinib + Ponatinib + Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response2accepted
EID4583

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT K550_W557del primary activating mutation demonstrated sensitivity to imatinib (IC50: 13nmol/L), sunitinib (IC50: 5nmol/L), regor… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT K558delinsNP1
Imatinib + Ponatinib + Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3accepted
EID4594

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT K558NP primary activating mutation demonstrated sensitivity to imatinib (IC50: 2nmol/L), sunitinib (IC50: 2nmol/L ), regorafenib… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT K642E2
Ponatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3accepted
EID7397

The GIST882 patient derived cell line expressing KIT K642E mutation demonstrated sensitivity to ponatinib (IC50: 31nmol/L) and sunitinib (IC50: 54nmol/L) treatments. In comparison, the insensitve KIT-… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Regorafenib AnhydrousGastrointestinal Stromal TumorPredictiveDDoes Not Support Sensitivity Response3rejected
EID7398

A cell line derived from GIST882 patients expressing KIT K642E mutation demonstrated insensitivity to regorafenib (IC50: 503nmol/L) treatment. IC50 was determined by assessing cell viability.

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT N822K2
PonatinibGastrointestinal Stromal TumorPredictiveDDoes Not Support Resistance3accepted
EID4167

A preclinical study tested the effect of a tyrosine kinase inhibitor (TKI) on Ba/F3 cell lines with primary ponatinib-sensitizing del 557-558 mutation, which induced IL-3 independent growth, and secon… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
〃Gastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4submitted
EID7408

Ponatinib possesses potent activity against N882K KIT mutant in preclinical experiments.

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT P551_E554delPMYE2
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response2accepted
EID4125

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT P551_E554delPMYE primary activating mutation demonstrated sensitivity to ponatinib treatment (IC50: 15nM). IC50 was determined b… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Imatinib + Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDDoes Not Support Sensitivity Response3accepted
EID4455

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT P551_E554delPMYE primary activating mutation demonstrated insensitivity to regorafenib (IC50: 141nmol/L), imatinib (IC50: 90nmol… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT T670I4
ImatinibGastrointestinal Stromal TumorPredictiveDSupports Resistance5accepted
EID7416

A preclinical study tested the effects of a tyrosine kinase inhibitor (TKI) on Ba/F3 cell lines with representative primary imatinib-sensitizing mutation del 557-558, which induced IL-3 independent gr… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Ponatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDDoes Not Support Resistance5accepted
EID7417

Several preclinical studies tested the effects of various tyrosine kinase inhibitors (TKIs) on Ba/F3 cell lines with representative primary ponatinib and sunitinib sensitizing mutation del 557-558, wh… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Regorafenib AnhydrousGastrointestinal Stromal TumorPredictiveDSupports Resistance4accepted
EID4510

A preclinical study tested the effects of a tyrosine kinase inhibitor (TKI) on Ba/F3 cell lines with representative primary regorafenib-sensitizing mutation del 557-558, which induced IL-3 independent… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
SunitinibGastrointestinal Stromal TumorPredictiveDDoes Not Support Resistance4rejected
EID7399

Several preclinical studies tested the effects of various tyrosine kinase inhibitors (TKIs) on Ba/F3 cell lines with representative primary sunitinib-sensitizing mutation del 557-558 and secondary mut… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT V559D2
Imatinib + Ponatinib + RegorafenibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response2accepted
EID4459

In an in vitro kinase study, a KIT V559D primary activating mutant kinase demonstrated sensitivity to imatinib (IC50: 36nmol/L vs. 640nmol/L), regorafenib (IC50: 57nmol/L vs. 533nmol/L), and ponatinib… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
SunitinibGastrointestinal Stromal TumorPredictiveDSupports Resistance—submitted
EID4592

In an in vitro study, a Ba/F3 cell line expressing KIT K558NP mutation (overexpression) demonstrated improved sensitivity to sunitinib treatment (IC50: 2nM vs. 8nM) compared to Ba/F3 cells expressing … (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT V560D1
Imatinib + Ponatinib + Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3accepted
EID4127

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT V560D primary activating mutation demonstrated sensitivity to imatinib (IC50: 3nmol/L), sunitinib (IC50: 2nmol/L), regorafenib (… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT V560G3
Imatinib + Ponatinib + RegorafenibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3accepted
EID7395

In an in vitro kinase study, a KIT V560G primary activating mutant kinase demonstrated sensitivity to imatinib (IC50: 38nmol/L vs. 640nmol/L), regorafenib (IC50: 27nmol/L vs. 533nmol/L), and ponatinib… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Imatinib + Ponatinib + Regorafenib AnhydrousGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3rejected
EID7394

In an in vitro kinase study, a KIT V560G primary activating mutant kinase demonstrated sensitivity to imatinib (IC50: 38nmol/L), regorafenib (IC50: 27nmol/L), and ponatinib (IC50: 0.3nmol/L) treatment… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
SunitinibGastrointestinal Stromal TumorPredictiveESupports Sensitivity Response2rejected
EID7396

In an in vitro kinase study, a KIT V560G primary activating mutant kinase demonstrated sensitivity to sunitinib (IC50: 154nmol/L vs. 110nmol/L) treatments. It is assumed that the native KIT mutation i… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT V560_L576del2
Imatinib + PonatinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4accepted
EID7393

In the patient-derived cell line GIST430 harboring KIT V560_L576del primary activating mutation implanted in mice, imatinib and ponatinib were shown to reduce KIT phosphorylation compared to the vehic… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Regorafenib AnhydrousGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response2accepted
EID4061

A GIST430 patient derived cell line expressing KIT V560_L576del primary activating mutation demonstrated insensitivity to regorafenib (IC50: 191nmol/L) treatment. IC50 was determined by assessing cell… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT V654A1
RegorafenibGastrointestinal Stromal TumorPredictiveDSupports Resistance4submitted
EID4148

In an in vitro study, Ba/F3 cell lines expressing different KIT primary mutations (known to confer sensitivity to regorafenib) and KIT V654A secondary mutation, KIT V654A was associated with decreased… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT W557_K558del2
Imatinib + PonatinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response3accepted
EID4084

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT W557_K558del primary activating mutation demonstrated sensitivity to imatinib (IC50: 27nmol/L) and ponatinib (IC50: 3nmol/L) tre… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Regorafenib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response2accepted
EID4087

In an in vitro study, an IL3 independent Ba/F3 cell line expressing KIT W557_K558del primary activating mutation demonstrated sensitivity to sunitinib (IC50: 7 +/- 2nmol/L) and regorafenib (IC50: 30 … (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT D820G + KIT W557_K558del2
PonatinibGastrointestinal Stromal TumorPredictiveDSupports Sensitivity Response4submitted
EID7412

Ponatinib possesses potent activity against D820G KIT mutant in preclinical experiments.

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
RegorafenibGastrointestinal Stromal TumorPredictiveDSupports Resistance2submitted
EID4165

In an in vitro study, a Ba/F3 cell line expressing KIT W557_K558del primary mutation (known to confer sensitivity to regorafenib) and KIT D820G secondary mutation, KIT D820G was associated with decrea… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT N822K + KIT W557_K558del2
Regorafenib AnhydrousGastrointestinal Stromal TumorPredictiveDSupports Resistance3accepted
EID4169

In a set of preclinical experiments associated with gastrointestinal stromal tumor, the effects of the tyrosine kinase inhibitor regorafenib on Ba/F3 cell lines harboring the primary regorafenib-sensi… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
Imatinib + SunitinibSubstitutesGastrointestinal Stromal TumorPredictiveDSupports Resistance4accepted
EID7414

Several preclinical studies tested the effects of various tyrosine kinase inhibitors (TKIs) on Ba/F3 cell lines with primary TKI-sensitizing del 557-558 mutation, which induced IL-3 independent growth… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic
KIT A502_Y503insAY1
SunitinibMalignant NeoplasmALIASPredictiveDSupports Sensitivity Response2accepted
EID7392

In an in vitro study, an IL3 independant Ba/F3 cell line expressing KIT V560D primary activating mutation demonstrated sensitivity to sunitinib treatment (IC50: 5nmol/L). IC50 was determined by assess… (full text at CIViC)

PMID 25239608 · Garner et al., 2014 · Open in CIViC

civic