Secondary Neoplasm — Genomics

Secondary Neoplasm — Genomics · CancerIndex

Genomics

Gene alteration frequencies by cohort

199 cohorts mapped to this entity or its descendants. Each frequency is affected / profiled within one cohort; cohorts are shown separately because case selection, sequencing depth and definitions differ. By default the cohort with the most cases profiled is shown.

Center for Cancer Genomics (CCG) Cancers of Unknown Primary Project (CUPP) CCG-CUPPCCG

28 cases with simple somatic mutation data · 272 cases total · Data Release 46.0 · mapped to Malignant Neoplasm of Unknown Primary ALIAS

gdcObserved30 genes · frequency = affected / profiled, as published by the cohort.

#	Gene	Alteration	Affected (n)	Profiled (n)	Frequency (%)

Cohorts mapped to a descendant (e.g. a subtype) are included because their cases belong to this entity by definition; the mapping and its match type are shown per cohort.

1	SEMA4A	Ssm	17	28	60.7%	gdc
16	KBTBD11	Ssm	16	28	57.1%	gdc
15	BCAN	Ssm	16	28	57.1%	gdc
7	NES	Ssm	16	28	57.1%	gdc
5	PRUNE1	Ssm	16	28	57.1%	gdc
14	PSMD4	Ssm	16	28	57.1%	gdc
13	INSRR	Ssm	16	28	57.1%	gdc
20	RHBG	Ssm	16	28	57.1%	gdc
12	LYSMD1	Ssm	16	28	57.1%	gdc
6	CDC42SE1	Ssm	16	28	57.1%	gdc
19	C1orf56	Ssm	16	28	57.1%	gdc
18	TMOD4	Ssm	16	28	57.1%	gdc
10	TNFAIP8L2	Ssm	16	28	57.1%	gdc
9	PIP5K1A	Ssm	16	28	57.1%	gdc
11	SCNM1	Ssm	16	28	57.1%	gdc
8	BNIPL	Ssm	16	28	57.1%	gdc
4	SEMA6C	Ssm	16	28	57.1%	gdc
17	VPS72	Ssm	16	28	57.1%	gdc
3	CREB3L4	Ssm	16	28	57.1%	gdc
2	MLLT11	Ssm	16	28	57.1%	gdc
40	ETV3	Ssm	15	28	53.6%	gdc
97	ETV3L	Ssm	15	28	53.6%	gdc
100	FAM189B	Ssm	15	28	53.6%	gdc
69	GABPB2	Ssm	15	28	53.6%	gdc
99	GATAD2B	Ssm	15	28	53.6%	gdc
70	GBA	Ssm	15	28	53.6%	gdc
28	GLMP	Ssm	15	28	53.6%	gdc
29	GOLPH3L	Ssm	15	28	53.6%	gdc
42	GON4L	Ssm	15	28	53.6%	gdc
86	GPATCH4	Ssm	15	28	53.6%	gdc